CDS

Accession Number TCMCG057C51755
gbkey CDS
Protein Id XP_018457383.1
Location complement(join(35356867..35356871,35356974..35357396,35357469..35357521,35357602..35357765,35357878..35358588,35358675..35358914,35359046..35359483,35359828..35360265,35360373..35360570))
Gene LOC108828252
GeneID 108828252
Organism Raphanus sativus

Protein

Length 889aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018601881.1
Definition PREDICTED: autophagy-related protein 18h-like isoform X3 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description Breast carcinoma amplified sequence 3
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000226        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0001952        [VIEW IN EMBL-EBI]
GO:0001953        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005102        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005874        [VIEW IN EMBL-EBI]
GO:0005881        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007017        [VIEW IN EMBL-EBI]
GO:0007030        [VIEW IN EMBL-EBI]
GO:0007162        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008047        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010256        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010594        [VIEW IN EMBL-EBI]
GO:0010595        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010632        [VIEW IN EMBL-EBI]
GO:0010634        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0010698        [VIEW IN EMBL-EBI]
GO:0010810        [VIEW IN EMBL-EBI]
GO:0010812        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0015631        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0030155        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0030334        [VIEW IN EMBL-EBI]
GO:0030335        [VIEW IN EMBL-EBI]
GO:0031023        [VIEW IN EMBL-EBI]
GO:0031252        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031344        [VIEW IN EMBL-EBI]
GO:0031346        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032386        [VIEW IN EMBL-EBI]
GO:0032388        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032878        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032880        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033157        [VIEW IN EMBL-EBI]
GO:0034260        [VIEW IN EMBL-EBI]
GO:0035035        [VIEW IN EMBL-EBI]
GO:0035148        [VIEW IN EMBL-EBI]
GO:0035239        [VIEW IN EMBL-EBI]
GO:0035257        [VIEW IN EMBL-EBI]
GO:0035295        [VIEW IN EMBL-EBI]
GO:0035327        [VIEW IN EMBL-EBI]
GO:0040012        [VIEW IN EMBL-EBI]
GO:0040017        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042393        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043086        [VIEW IN EMBL-EBI]
GO:0043087        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043547        [VIEW IN EMBL-EBI]
GO:0043627        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044092        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045111        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0048487        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051050        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051222        [VIEW IN EMBL-EBI]
GO:0051223        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051270        [VIEW IN EMBL-EBI]
GO:0051272        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051345        [VIEW IN EMBL-EBI]
GO:0051346        [VIEW IN EMBL-EBI]
GO:0051427        [VIEW IN EMBL-EBI]
GO:0051489        [VIEW IN EMBL-EBI]
GO:0051491        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051495        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051893        [VIEW IN EMBL-EBI]
GO:0051895        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060341        [VIEW IN EMBL-EBI]
GO:0060491        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070201        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071391        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090087        [VIEW IN EMBL-EBI]
GO:0090109        [VIEW IN EMBL-EBI]
GO:0090316        [VIEW IN EMBL-EBI]
GO:0090630        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:0099513        [VIEW IN EMBL-EBI]
GO:0120032        [VIEW IN EMBL-EBI]
GO:0120034        [VIEW IN EMBL-EBI]
GO:0120035        [VIEW IN EMBL-EBI]
GO:1901888        [VIEW IN EMBL-EBI]
GO:1901889        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903391        [VIEW IN EMBL-EBI]
GO:1903392        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1903827        [VIEW IN EMBL-EBI]
GO:1903829        [VIEW IN EMBL-EBI]
GO:1904951        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000114        [VIEW IN EMBL-EBI]
GO:2000145        [VIEW IN EMBL-EBI]
GO:2000147        [VIEW IN EMBL-EBI]
GO:2000249        [VIEW IN EMBL-EBI]
GO:2000251        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGAGCAGCACCACCAAGGTCAACAACAACAACAACAACGGAGTTGTTAATCACCAAACGACGACCAACCGCTTTTTACCTAATTCCCTAAAATTCATCTCCTCCTGCATCAAAACCGCTTCCTCCGGCGTACGCTCAGCTAGCGCCTCCGTCGCCGCCTCTCTCTCGTCCGATTCCCAGGAGCTCAAGGATCAGCAGGTGTTGTGGTCATCCTTCGATAGATTACAAACAAGCGAATCTTCTTTCAAAAACGTCCTTCTTCTCGGTTACGCCAACGGCTTTCAAGTCGTTGATATCGACGACGCGAGCCACGTCAGCGAGCTTGTGTCGAGGCGGGATGATCCCGTTACGTTTCTGCAGATGCAGCCTTTGCCTGCTAGATGCGAAGGAGTCGAAGGGTTTAGATCGTCGCATCCGATGCTTTTAGCTGTTGCTGATGAATCATCATCCAATGGTTCAGCAGCTTCTGTTGTAACTGGCGGCAGAGATGATGGTCCTCTCGCACTCTCTCCCACGGTTGTGCGGTTCTATTCACTTCGATCTCACAACTACGTTCACGTTTTGAGATTCCGTTCTACTGTTTATATGGTTAGATGCAGTCCCCGGATTGTAGCTGTTGGCCTTCGTTCACAGATTTACTGTTTTGATGCGCTAACACTTGAAAACAAATTCAGTGTGCTCTCGTATCCTGTTCCTCAGCTTGGGTCAAACCAAGGGATATCTGAGGTCAATGTAGGATACGGTCCGATGTCTGTCGGACCGAGATGGTTGGCTTATGCTTCCAACGGTCCTTTATCGTCTAGTTTAGGTCGACTGAGCCCTCAGAATGTTACTCCTGGCGTCAGTCCATCTACGTCGCCGAGTGGTGGTAATCTGGTGGCGAGGTACGCCATGGAATCTAGTAAGCATCTGGCGGCGGGTTTACTCAATTTGGGTGATAAGGGTTACAAGACTATATCTAAATACTGTCAAGATCTCAAGCATGACGGTCCTGGTTCTTCTCTTTCCTCCAGTCCTGGTTGGAAAGTTGGTCGGGCTGCATCTTCAGCTGAGTCTGATGTTGCTGGAATGGTTATTGTCAAGGATTTTGAATCTCGAGCGACTATAGCACACTTCAGGGCTCACACTAGTCCAATATCGGCTCTTTGTTTTGACCCAAGTGGCACTCTATTAGTAACGGCCTCAATCCACGGTAACAATATTAACGTTTTCCGGATTATGCCTTCAAAGAATGGATCAGGTGCTCAAAGCTATGATTGGAGCTCCTCACATGTGCCTCTTTATAAATTGCATCGTGGCATGACATCAGCTGTAATACAAGATATTTGCTTTAGCAGCTACAGTCAATGGATTGCTATTGTGTCATCTAAGGGAACCTGTCATATTTATGTTTTATCCCCTTTCGGTGGAGAAAATGTTCTTGAGGTAAGGAATTCTTATGTCGATGGACCAACGCTTGCTCCAACGTTGTCTCTACCATGGTGGTCGAGTCCATCTTTTATGACCACCCAGTATTCGTTTCCACCGCCAGCATCGGTAACTCTCTCTGTTGTTACCCGAATCAAATGCAACAGTTTCTTCCATGCTGCAAGTTCCGTTGTAGGAAAACCATCTTCCTTCCCTTCCGGTTGTCTCGCTGCTGTTTTCCACCAATCCGTGCAGTCGTCAGCTCATGCATTGGACTATCTACTGGTTTACACTCCGTCCGGTCATGTAGTTCAGTACAAACTTGTTCCATCTCTCGGAGGAGACCAGCCTGAGAGCAATTCTCGAATTGGTTCCGCCGCTGAAGAGGAACTGAGAGTGAAAGTCGAACCTCTTCAGTGTTGGGATGTCTGCCGGAAAACAAATTGGCCAGAGAGAGAGGAGAACATATGTGGACTTACTTTTGACGGACGGAAAGTTGTTGAGACTTCTGATAGTGAAGATCTAGCGAAGCCACTTGAGAAACACCACGTTTATCTTGCCAATGCAGAGGTGCTGATAAACTCGGGAAGAAAACCAATCTGGCAAAACTCAGAGATATCTTTCTATCCGATGTTCAATGATGTGAATTTGAATCATCATGGAGGCGGCGGGGAGATGAAAATCGAGAAAGTATCTGCAAATGAGGTTGATATCAGAAGGAAGGATTTGCTTCCGGTGTTTGATAATTTTCACAGTGTTTATTCCAGTATGCGCAACAGAGGATTCCCCGTGGAAAGAGATTCTTCTTCTTCTGAGCCTGGAAAAATTAAAGCAGGCATGGCTTACACCGAGAATGAGGAGGAAAGAAGTGGAACTGTAACATTCAAACAACCCGTGGTTTCGATTTCTTCTGCTGTCAAAGACAGCGATTATACTATAGACGAGGCTCATATGTTGCTAAAGAACGCCTCCCTGCCCGCTGAAACAACTATTGAAAACAACAGCGGGACAAGTGGAGCTTCTTCAAATGTAAGTTCTAACCGTTCTGATTTGAGCATGAATGCAGGAGCGGAAAGTGAGGAGGGTTGTGCCATTGATGGCTCCCCAGATTTTCAGCAGTTTTTCAAGGAAACTGCTGAAGAAGCAGAGGTAAAGGATGATCCATCTGATCAAAGAAAAGTAAATGATGATGCTGACGAGGATAACGACGACGATGACGACATGCTTGGTGGTGTTTTCGCTTTCTCTGAAGAAGGTTGA
Protein:  
MKSSTTKVNNNNNNGVVNHQTTTNRFLPNSLKFISSCIKTASSGVRSASASVAASLSSDSQELKDQQVLWSSFDRLQTSESSFKNVLLLGYANGFQVVDIDDASHVSELVSRRDDPVTFLQMQPLPARCEGVEGFRSSHPMLLAVADESSSNGSAASVVTGGRDDGPLALSPTVVRFYSLRSHNYVHVLRFRSTVYMVRCSPRIVAVGLRSQIYCFDALTLENKFSVLSYPVPQLGSNQGISEVNVGYGPMSVGPRWLAYASNGPLSSSLGRLSPQNVTPGVSPSTSPSGGNLVARYAMESSKHLAAGLLNLGDKGYKTISKYCQDLKHDGPGSSLSSSPGWKVGRAASSAESDVAGMVIVKDFESRATIAHFRAHTSPISALCFDPSGTLLVTASIHGNNINVFRIMPSKNGSGAQSYDWSSSHVPLYKLHRGMTSAVIQDICFSSYSQWIAIVSSKGTCHIYVLSPFGGENVLEVRNSYVDGPTLAPTLSLPWWSSPSFMTTQYSFPPPASVTLSVVTRIKCNSFFHAASSVVGKPSSFPSGCLAAVFHQSVQSSAHALDYLLVYTPSGHVVQYKLVPSLGGDQPESNSRIGSAAEEELRVKVEPLQCWDVCRKTNWPEREENICGLTFDGRKVVETSDSEDLAKPLEKHHVYLANAEVLINSGRKPIWQNSEISFYPMFNDVNLNHHGGGGEMKIEKVSANEVDIRRKDLLPVFDNFHSVYSSMRNRGFPVERDSSSSEPGKIKAGMAYTENEEERSGTVTFKQPVVSISSAVKDSDYTIDEAHMLLKNASLPAETTIENNSGTSGASSNVSSNRSDLSMNAGAESEEGCAIDGSPDFQQFFKETAEEAEVKDDPSDQRKVNDDADEDNDDDDDMLGGVFAFSEEG